Index A | C | D | E | G | H | I | L | M | P | R | S | T | V A adata (cpa.CPA property) adata_manager (cpa.CPA property) C ComPertAPI (class in cpa) compute_comb_emb() (cpa.ComPertAPI method) compute_uncertainty() (cpa.ComPertAPI method) convert_legacy_save() (cpa.CPA class method) covars_encoder (cpa.CPA attribute) CPA (class in cpa) CPAModule (class in cpa) custom_predict() (cpa.CPA method) D device (cpa.CPA property) disentanglement() (cpa.CPAModule method) E evaluate_r2() (cpa.ComPertAPI method) G generative() (cpa.CPAModule method) get_anndata_manager() (cpa.CPA method) get_covar_embeddings() (cpa.CPA method) get_covars_embeddings() (cpa.ComPertAPI method) get_cycle_uncertainty() (cpa.ComPertAPI method) get_drug_encoding_() (cpa.ComPertAPI method) get_expression() (cpa.CPAModule method) get_from_registry() (cpa.CPA method) get_latent_representation() (cpa.CPA method) get_pert_embeddings() (cpa.ComPertAPI method) (cpa.CPA method) (cpa.CPAModule method) get_response() (cpa.ComPertAPI method) get_response2D() (cpa.ComPertAPI method) get_response_reference() (cpa.ComPertAPI method) H history (cpa.CPA property) I inference() (cpa.CPAModule method) is_trained (cpa.CPA property) L latent_dose_response() (cpa.ComPertAPI method) latent_dose_response2D() (cpa.ComPertAPI method) load() (cpa.CPA class method) load_registry() (cpa.CPA static method) loss() (cpa.CPAModule method) M mix_drugs() (cpa.ComPertAPI method) mixup_data() (cpa.CPAModule method) P pert_encoder (cpa.CPA attribute) pert_smiles_map (cpa.CPA attribute) predict() (cpa.ComPertAPI method) (cpa.CPA method) print_complete_cycle_uncertainty() (cpa.ComPertAPI method) R r2_metric() (cpa.CPAModule method) register_manager() (cpa.CPA class method) S save() (cpa.CPA method) setup_anndata() (cpa.CPA class method) T test_indices (cpa.CPA property) to_device() (cpa.CPA method) train() (cpa.CPA method) train_indices (cpa.CPA property) V validation_indices (cpa.CPA property) view_anndata_setup() (cpa.CPA method) view_setup_args() (cpa.CPA static method)