cpa.ComPertAPI.get_cycle_uncertainty

ComPertAPI.get_cycle_uncertainty(genes_from, df_from, df_to, ncells_max=100, direction='forward')

Uncertainty for a single condition.

Parameters:

genes_from torch.Tensor

Genes for comparison.

df_from pd.DataFrame

Full description of the condition.

df_to pd.DataFrame

Full description of the control condition.

ncells_max int, optional (defaul: 100)

Max number of cells to use.

Returns:

: tuple

with uncertainty estimations: (MSE, 1-R2).